timeseriesimage2matrix: Time-series image to matrix

Description Usage Arguments Value Author(s) Examples

Description

Extract a matrix from a time-series image after applying a mask.

Usage

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timeseriesimage2matrix( img , mask )

Arguments

img

Input image of type 'antsImage' or R array.

mask

Input mask of type 'antsImage' or R array. In either case, the number of voxels in the mask may be either equal to that of input image 'img' or equal to number of voxels in one time unit of input image 'img'. In the second case, the mask is reused for every time unit of the 'img'.

Value

Success – an R matrix of dimensions ( dim(img)[length(dim(img))] , sum(mask==1) )

Author(s)

Shrinidhi KL

Examples

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## Not run: 
img <- antsImageRead( "input.nii" , 4 )
mask <- array( 1 , dim(img)[1:3] )
# set some values of mask to FALSE ...

mat <- timeseriesimage2matrix( img , mask )

## End(Not run)

stnava/itkImageR documentation built on May 30, 2019, 7:21 p.m.