test_all_strains: Test all strains for change in phosphate accumulation

Description Usage Arguments Value Author(s)

View source: R/test_all_strains.r

Description

Performs anova in every strain and returns log-fold change versus no bacteria. Performs anova independently in eveyr combination of StartP and EndP levels

Usage

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test_all_strains(Strains, treatment_col, treatment_control = "No Bacteria",
  Master, plot = FALSE, StartP.levels = c("minusP", "plusP"),
  EndP.levels = c("100uM", "30uM"))

Arguments

Strains

vector of strain names

treatment_col

Column name with variable to test

Master

data.frame with all data

plot

logical produce plot?

StartP.levels

New neames for StartP levels. It must be in the same order as the levels in Master

EndP.levels

New names for EndP levels. Must be in the same order as levels in Master.

treament_control

level to use as reference for anova

Value

A list.

Author(s)

Sur Herrera Paredes


surh/wheelP documentation built on Feb. 21, 2018, 7:40 p.m.