Files in symbioticMe/proBatch
Tools for Batch Effects Diagnostics and Correction

.Rbuildignore
.gitignore
DESCRIPTION
Meta/vignette.rds
NAMESPACE
NAMESPACE.rej
R/auxiliary.R R/colors_for_annotation.R R/correct_batch_effects.R R/correlation-based_diagnostics.R R/data.R R/date_conversion.R R/feature_level_diagnostics.R R/fit_non_linear.R R/initial_assessment.R R/normalize.R R/proBatch.R R/proteome_wide_diagnostics.R README.md
data/example_peptide_annotation.rda
data/example_proteome.rda
data/example_proteome_matrix.rda
data/example_sample_annotation.rda
inst/CITATION
man/adjust_batch_trend.Rd man/color_list_to_df.Rd man/correct_batch.Rd man/correct_with_ComBat.Rd man/create_peptide_annotation.Rd man/date_to_sample_order.Rd man/dates_to_posix.Rd man/example_peptide_annotation.Rd man/example_proteome.Rd man/example_proteome_matrix.Rd man/example_sample_annotation.Rd man/fit_nonlinear.Rd man/generate_colors_for_numeric.Rd man/get_peptide_corr_df.Rd man/get_sample_corr_distrib.Rd man/log_transform.Rd man/long_to_matrix.Rd man/matrix_to_long.Rd man/merge_rare_levels.Rd man/normalize.Rd man/normalize_data.Rd man/normalize_sample_medians.Rd man/plot_PCA.Rd man/plot_PVCA.Rd man/plot_corr_matrix.Rd man/plot_heatmap.Rd man/plot_hierarchical_clustering.Rd man/plot_iRT.Rd man/plot_peptide_corr_distribution.Rd man/plot_peptides_of_one_protein.Rd man/plot_protein_corrplot.Rd man/plot_sample_corr_distribution.Rd man/plot_sample_corr_heatmap.Rd man/plot_sample_mean_or_boxplot.Rd man/plot_single_feature.Rd man/plot_spike_in.Rd man/plot_with_fitting_curve.Rd man/proBatch.Rd man/quantile_normalize.Rd man/sample_annotation_to_colors.Rd
vignettes/.gitignore
vignettes/Batch_effects_workflow_staircase.png
vignettes/proBatch_vignette.Rmd
vignettes/pvca_quantile_normalized.png
symbioticMe/proBatch documentation built on Jan. 22, 2019, 5:17 p.m.