API for t-arae/bstringr
A package to use a character vector as a biological strings
| Global functions | |
|---|---|
| %>% | Man page |
| Bio2bstr | Man page Source code |
| [.bstr | Man page |
| `bstr_sub_all<-` | Source code |
| add_FEATURES_FIELD_HEADER | Source code |
| add_i_mod | Source code |
| align_multi | Man page |
| align_pairwise | Man page |
| as_bstr | Man page Source code |
| as_dstr | Man page Source code |
| as_pstr | Man page Source code |
| bstr | Man page Source code |
| bstr2BioString | Man page Source code |
| bstr2df | Man page Source code Source code |
| bstr2longdf | Man page Source code |
| bstr_add_obj_at | Man page Source code |
| bstr_add_seq_at | Man page Source code |
| bstr_align_multi | Man page Source code |
| bstr_align_pairwise | Man page Source code |
| bstr_count | Man page Source code |
| bstr_detect | Man page Source code |
| bstr_extract | Man page Source code |
| bstr_length | Man page Source code |
| bstr_locate | Man page Source code |
| bstr_rand_seq | Man page Source code |
| bstr_remove | Man page Source code |
| bstr_remove_gap | Man page Source code |
| bstr_remove_notalpha | Man page Source code |
| bstr_remove_num | Man page Source code |
| bstr_replace | Man page Source code |
| bstr_replace_name | Man page Source code |
| bstr_reverse | Man page Source code |
| bstr_sort | Man page Source code |
| bstr_sort_subname | Man page Source code |
| bstr_sub | Man page Source code |
| bstr_sub<- | Man page |
| bstr_sub_all | Man page Source code |
| bstr_sub_all<- | Man page |
| bstr_sub_all_replace | Man page |
| bstr_sub_replace | Man page Source code |
| bstr_sub_replace_all | Man page Source code |
| bstr_sub_true | Man page Source code |
| bstr_switch_case | Man page Source code |
| bstr_to_lower | Man page Source code |
| bstr_to_upper | Man page Source code |
| c.bstr | Man page |
| calc_GCper | Man page Source code |
| calc_InFusion_insert_volume | Man page Source code |
| calc_InFusion_vector_volume | Man page Source code |
| calc_ident | Man page Source code |
| calc_ident_mat | Man page |
| calc_mw | Man page |
| calc_mw_dsDNA | Man page Source code |
| calc_mw_peptide | Man page Source code |
| calc_mw_ssRNA | Man page Source code |
| calc_oligoDNATm | Man page Source code |
| case | Man page |
| check_validity | Man page |
| class_bstr | Man page |
| compare | Man page Source code |
| construct_bstr | Man page |
| create_FEATURE | Source code |
| df2bstr | Man page Source code Source code |
| dstr | Man page Source code |
| dstr_align_multi | Man page Source code |
| dstr_align_pairwise | Man page Source code |
| dstr_both | Man page |
| dstr_complement | Man page Source code |
| dstr_complement_fast | Man page |
| dstr_count_both | Man page Source code |
| dstr_detect_both | Man page Source code |
| dstr_extract_orfs | Man page Source code |
| dstr_extract_orfs_from_vector | Man page |
| dstr_find_orfs | Man page |
| dstr_find_orfs_from_vector | Man page |
| dstr_gw_lr | Man page |
| dstr_gw_lr_both | Man page |
| dstr_gw_topo | Man page Source code |
| dstr_gw_topo_lr | Man page |
| dstr_iupac2regex | Man page Source code |
| dstr_locate_both | Man page Source code |
| dstr_locate_orfs | Man page Source code |
| dstr_pcr | Man page Source code |
| dstr_primer_check | Man page Source code |
| dstr_rand_seq | Man page Source code |
| dstr_remove_stop | Man page Source code |
| dstr_rev_comp | Man page Source code |
| dstr_rev_comp_fast | Man page |
| dstr_translate | Man page Source code |
| dstr_translate_from_vector | Man page |
| extract_aligned_pat | Source code |
| extract_aligned_sub | Source code |
| format_parts_length | Man page Source code |
| format_parts_name | Man page Source code |
| format_parts_seq | Man page Source code |
| format_row | Man page Source code |
| get_console_width | Source code |
| get_pentr | Man page Source code |
| gw | Man page |
| include_blank_header_line | Source code |
| insert_FEATURES | Source code |
| is_bstr | Man page Source code |
| is_dstr | Man page Source code |
| is_pstr | Man page Source code |
| is_valid_aa_character | Man page Source code |
| is_valid_dna_character | Man page Source code |
| is_valid_orf | Man page |
| length | Man page |
| longdf2bstr | Man page Source code |
| mf | Man page Source code |
| orfs | Man page |
| pairwise_alignment | Source code |
| parse_ACCESSION_FIELD | Man page |
| parse_DEFINITION_FIELD | Man page Source code |
| parse_LOCUS_FIELD | Man page Source code |
| parse_ORIGIN_FIELD | Man page |
| parse_VERSION_FIELD | Man page |
| print.bstr | Man page Source code |
| pstr | Man page Source code |
| pstr_rand_seq | Man page Source code |
| random_seq | Man page |
| read_fasta | Man page Source code |
| read_genbank | Man page Source code |
| read_sample_excel | Source code |
| remove | Man page |
| return_pos_range | Source code |
| reverse | Man page |
| show_align | Man page Source code |
| sort.bstr | Man page Source code |
| sub | Man page |
| sub_all | Man page |
| subset_at | Source code |
| unlist_bstr | Source code |
| write_fasta | Man page Source code |
| write_genbank | Man page Source code |
