Files in t-arae/bstringr
A package to use a character vector as a biological strings

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE.md
NAMESPACE
R/DATA.R R/align.R R/bstr-methods.R R/bstr2df.R R/bstr_case.R R/bstr_count.R R/bstr_detect.R R/bstr_extract.R R/bstr_length.R R/bstr_locate.R R/bstr_remove.R R/bstr_replace.R R/bstr_reverse.R R/bstr_sub.R R/calc_identity.R R/calc_mw.R R/class-bstr.R R/dev-plot_bstr.R R/dstr-methods.R R/dstr_complement.R R/dstr_methods-primer.R R/dstr_misc_both.R R/dstr_misc_gw.R R/dstr_misc_orfs.R R/dstr_translate.R R/general.R R/infusion.R R/io_fasta.R R/io_genbank.R R/is_valid.R R/plot_bstr.R R/print-bstr.R R/rand_seq.R R/read_sample_excel.R R/rename.R R/shade_color_pallete.R R/show_align.R R/temp.R R/unlist.R R/utils-pipe.R README.Rmd README.md
_pkgdown.yml
bstringr.Rproj
codecov.yml
docs/404.html
docs/LICENSE.html
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Bio2bstr.html
docs/reference/bstr2BioString.html
docs/reference/bstr_add_attr_for_object.html
docs/reference/bstr_add_attr_for_seq.html
docs/reference/bstr_align.html
docs/reference/bstr_multi_align.html
docs/reference/bstr_replace.html
docs/reference/bstr_sub_true.html
docs/reference/c.bstr.html
docs/reference/calc_GCper.html
docs/reference/calc_InFusion_insert_volume.html
docs/reference/calc_InFusion_vector_volume.html
docs/reference/calc_MW_dsDNA.html
docs/reference/calc_MW_peptide.html
docs/reference/calc_MW_ssRNA.html
docs/reference/calc_ident.html
docs/reference/calc_ident_mat.html
docs/reference/calc_oligoDNATm.html
docs/reference/case.html
docs/reference/class_bstr.html
docs/reference/compare.html
docs/reference/construct_bstr.html
docs/reference/dstr_LR.html
docs/reference/dstr_TOPO.html
docs/reference/dstr_TOPO_LR.html
docs/reference/dstr_align.html
docs/reference/dstr_complement.html
docs/reference/dstr_extract_orfs_from_vector.html
docs/reference/dstr_find_orf.html
docs/reference/dstr_find_orf_from_vector.html
docs/reference/dstr_iupac2regex.html
docs/reference/dstr_multi_align.html
docs/reference/dstr_pcr.html
docs/reference/dstr_primer_check.html
docs/reference/dstr_remove_stop.html
docs/reference/dstr_rev_comp.html
docs/reference/dstr_translate.html
docs/reference/dstr_translate_from_vector.html
docs/reference/format_parts_length.html
docs/reference/format_parts_name.html
docs/reference/format_parts_seq.html
docs/reference/format_row.html
docs/reference/index.html
docs/reference/is_valid_aa_character.html
docs/reference/is_valid_dna_character.html
docs/reference/length.html
docs/reference/mf.html
docs/reference/parse_ACCESSION_FIELD.html
docs/reference/parse_DEFINITION_FIELD.html
docs/reference/parse_LOCUS_FIELD.html
docs/reference/parse_ORIGIN_FIELD.html
docs/reference/parse_VERSION_FIELD.html
docs/reference/pipe.html
docs/reference/print.bstr.html
docs/reference/random_seq.html
docs/reference/read_fasta.html
docs/reference/read_genbank.html
docs/reference/remove.html
docs/reference/reverse.html
docs/reference/sort.bstr.html
docs/reference/sub-.bstr.html
docs/reference/sub.html
docs/reference/sub_all.html
docs/reference/write_fasta.html
docs/reference/write_genbank.html
inst/extdata/sample.gb
inst/extdata/test.fas
man/Bio2bstr.Rd man/align_multi.Rd man/align_pairwise.Rd man/bstr2BioString.Rd man/bstr2df.Rd man/bstr_add_obj_at.Rd man/bstr_add_seq_at.Rd man/bstr_count.Rd man/bstr_detect.Rd man/bstr_extract.Rd man/bstr_locate.Rd man/bstr_replace.Rd man/bstr_replace_name.Rd man/bstr_sub_true.Rd man/c.bstr.Rd man/calc_GCper.Rd man/calc_InFusion_insert_volume.Rd man/calc_InFusion_vector_volume.Rd man/calc_ident.Rd man/calc_ident_mat.Rd man/calc_mw.Rd man/calc_oligoDNATm.Rd man/case.Rd man/check_validity.Rd man/class_bstr.Rd man/compare.Rd man/construct_bstr.Rd man/dstr_both.Rd man/dstr_complement.Rd man/dstr_extract_orfs_from_vector.Rd man/dstr_iupac2regex.Rd man/dstr_pcr.Rd man/dstr_primer_check.Rd man/dstr_remove_stop.Rd man/dstr_rev_comp.Rd man/dstr_translate.Rd man/format_parts_length.Rd man/format_parts_name.Rd man/format_parts_seq.Rd man/format_row.Rd man/gw.Rd man/is_valid_orf.Rd man/length.Rd man/mf.Rd man/orfs.Rd man/parse_ACCESSION_FIELD.Rd man/parse_DEFINITION_FIELD.Rd man/parse_LOCUS_FIELD.Rd man/parse_ORIGIN_FIELD.Rd man/parse_VERSION_FIELD.Rd man/pipe.Rd man/print.bstr.Rd man/random_seq.Rd man/read_fasta.Rd man/read_genbank.Rd man/remove.Rd man/reverse.Rd man/show_align.Rd man/sort.bstr.Rd man/sub-.bstr.Rd man/sub.Rd man/sub_all.Rd man/write_fasta.Rd man/write_genbank.Rd tests/testthat.R tests/testthat/test-bstr-methods-trans.R tests/testthat/test-bstr-methods.R tests/testthat/test-calc_identity.R tests/testthat/test-class-bstr.R tests/testthat/test-class-dstr.R tests/testthat/test-class-pstr.R tests/testthat/test-dstr-methods.R tests/testthat/test-fasta-io.R
t-arae/bstringr documentation built on March 18, 2021, 3:08 a.m.