dstr_both: Apply function to both forward and reverse-complement...
In t-arae/bstringr: A package to use a character vector as a biological strings
Description
Usage
Arguments
Examples
Description
Apply function to both forward and reverse-complement sequences.
Usage
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dstr_detect_both(dstrobj, pattern, negate = FALSE)
dstr_count_both(dstrobj, pattern)
dstr_locate_both(dstrobj, pattern)
Arguments
dstrobj
dstr class object or character vector
pattern
regex pattern
negate
If TRUE, return non-matching elements.
Examples
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temp <- c("aaagggcccc", "aaagggtttcccctttccc", "gggtttccc")
dstr_detect_both(temp, "aaa")
dstr_count_both(temp, "aaa")
dstr_locate_both(temp, "aaa")
dstr_locate_both(temp, "aaa") %>%
lapply(. %>% bstr_sub_all(temp, .))
t-arae/bstringr documentation built on March 18, 2021, 3:08 a.m.
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Description Usage Arguments Examples
Description
Apply function to both forward and reverse-complement sequences.
Usage
1 2 3 4 5 | dstr_detect_both(dstrobj, pattern, negate = FALSE)
dstr_count_both(dstrobj, pattern)
dstr_locate_both(dstrobj, pattern)
|
Arguments
dstrobj |
dstr class object or character vector |
pattern |
regex pattern |
negate |
If TRUE, return non-matching elements. |
Examples
1 2 3 4 5 6 | temp <- c("aaagggcccc", "aaagggtttcccctttccc", "gggtttccc")
dstr_detect_both(temp, "aaa")
dstr_count_both(temp, "aaa")
dstr_locate_both(temp, "aaa")
dstr_locate_both(temp, "aaa") %>%
lapply(. %>% bstr_sub_all(temp, .))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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