gpatterns.frag_stats: transforms patterns to summary statistics: n,n0,n1,nx,nc,meth...
In tanaylab/gpatterns: Single Molecule Methylation Patterns Analysis Suite
gpatterns.frag_stats R Documentation
transforms patterns to summary statistics: n,n0,n1,nx,nc,meth and epipoly
Description
transforms patterns to summary statistics: n,n0,n1,nx,nc,meth and epipoly
Usage
gpatterns.frag_stats(patterns_tab, noise_threshold = 0.2)
Arguments
patterns_tab
patterns table (needs to have 'fid' and 'pattern' fields)
noise_threshold
thershold of a pattern to be considered 'noise'
tanaylab/gpatterns documentation built on May 15, 2023, 6:23 p.m.
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| gpatterns.frag_stats | R Documentation |
transforms patterns to summary statistics: n,n0,n1,nx,nc,meth and epipoly
Description
transforms patterns to summary statistics: n,n0,n1,nx,nc,meth and epipoly
Usage
gpatterns.frag_stats(patterns_tab, noise_threshold = 0.2)
Arguments
patterns_tab |
patterns table (needs to have 'fid' and 'pattern' fields) |
noise_threshold |
thershold of a pattern to be considered 'noise' |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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