Files in tgrimes/SeqNet
Generate RNA-seq data from regulatory networks

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/corr.R R/cpls.R R/create_network.R R/example.R R/fdr.R R/gen_gamma_poisson.R R/gen_gaussian.R R/getter.R R/glasso.R R/icorr.R R/pcor.R R/performance_measures.R R/plot_network.R R/set_low_rank_scores_to_zero.R R/wgcna.R README.md
SeqNet.Rproj
data/kidney.rda
doc/presentation.pdf doc/report.pdf doc/validate_generated_profiles.Rmd man/add_sign_to_network.Rd man/add_weight_to_network.Rd man/as.CONFUSION.Rd man/as.data.frame.CONFUSION.Rd man/create_network.Rd man/create_network_from_adjacency.Rd man/fdr.Rd man/gen_gamma_poisson.Rd man/gen_gaussian.Rd man/gen_gaussian_list.Rd man/get_adj_matrix_from_network.Rd man/get_confusion_matrix.Rd man/get_degree_change.Rd man/get_degree_distribution.Rd man/get_pathway_list.Rd man/get_reference_count_means.Rd man/get_sigma_from_precision_list.Rd man/get_summary_for_node.Rd man/isSymmetric.shrinkage.Rd man/normalize_cpls_scores.Rd man/plot.CONFUSION.Rd man/plot.network.Rd man/plot_network.Rd man/plot_network_diff.Rd man/print.CONFUSION.Rd man/random_precision_from_network_list.Rd man/remove_connections_to_node.Rd man/remove_node_from_clique.Rd man/remove_node_from_hub.Rd man/remove_node_from_module.Rd man/remove_small_components_from_module.Rd man/rewire_connections_to_node.Rd man/run_corr.Rd man/run_cpls.Rd man/run_cpls_parallel.Rd man/run_example.Rd man/run_glasso.Rd man/run_icorr.Rd man/run_pcor.Rd man/run_wgcna.Rd man/scores_to_adjacency_matrix.Rd man/set_low_rank_scores_to_zero.Rd man/summarize_confusion.Rd man/vector_to_matrix.Rd
tgrimes/SeqNet documentation built on Dec. 1, 2018, 6:55 a.m.