add_observed_values_directness: Add observed values for phyloscanner results for directness
In thednainus/HIVepisimAnalysis: Functions to analyse results from network analysis
View source: R/summary_utils.R
add_observed_values_directness R Documentation
Add observed values for phyloscanner results for directness
Description
Add observed values for phyloscanner results for directness
Usage
add_observed_values_directness(df1)
Arguments
df1
Details
If observed value is TP (true positives), it means that
phyloscanner correctly identified a transmission pair with correct direction
of transmission(A infected B or B infected A). If observed value
is FP (false positives), phyloscanner incorrectly identify a transmission
pair. If observed value is FN (false negative), it means it is a true
transmission pair (with correct direction of transmission from A to B or
B to A), but phyloscanner was not able to identify it. If
observed value is TN (true negative), it means it is not a transmission
pair and phyloscanner correctly identified it as not a transmission pair
(with correct direction of transmission from A to B or B to A).
Value
dataframe with the added observed values
thednainus/HIVepisimAnalysis documentation built on Sept. 21, 2023, 7:32 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/summary_utils.R
| add_observed_values_directness | R Documentation |
Add observed values for phyloscanner results for directness
Description
Add observed values for phyloscanner results for directness
Usage
add_observed_values_directness(df1)
Arguments
df1 |
Details
If observed value is TP (true positives), it means that phyloscanner correctly identified a transmission pair with correct direction of transmission(A infected B or B infected A). If observed value is FP (false positives), phyloscanner incorrectly identify a transmission pair. If observed value is FN (false negative), it means it is a true transmission pair (with correct direction of transmission from A to B or B to A), but phyloscanner was not able to identify it. If observed value is TN (true negative), it means it is not a transmission pair and phyloscanner correctly identified it as not a transmission pair (with correct direction of transmission from A to B or B to A).
Value
dataframe with the added observed values
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.