create_transmissions_tsv: Create transmission matrix tsv

In thednainus/HIVepisimAnalysis: Functions to analyse results from network analysis

Create transmission matrix tsv

Description

Create a transmission matrix file to be used with the CoaTrans. CoaTrans. requires that seeds are included in the file.

Usage

create_transmissions_tsv(tm, time_tr, prefix = NULL)

Arguments

tm	Transmission matrix as returned using the function get_transmat
time_tr	Time of transmission for seeds. The other time of transmission should be provided in the tm dataframe.
prefix	Text for prefix to use when saving filename.

Details

If a prefix is not provided, tsv file will be saved as transmissions.tsv

Value

Write data to tsv file.

thednainus/HIVepisimAnalysis documentation built on Sept. 21, 2023, 7:32 a.m.