generate_stats: generate_stats

In thierrygosselin/radiator: RADseq Data Exploration, Manipulation and Visualization using R

generate_stats

Description

Generate individuals and markers statistics

Usage

generate_stats(
  gds,
  individuals = TRUE,
  markers = TRUE,
  missing = TRUE,
  heterozygosity = TRUE,
  coverage = TRUE,
  allele.coverage = TRUE,
  mac = TRUE,
  snp.position.read = TRUE,
  snp.per.locus = TRUE,
  subsample = NULL,
  exhaustive = TRUE,
  force.stats = TRUE,
  path.folder = NULL,
  plot = TRUE,
  digits = 6,
  file.date = NULL,
  parallel.core = parallel::detectCores() - 1,
  verbose = TRUE
)

thierrygosselin/radiator documentation built on May 5, 2024, 5:12 a.m.