Files in tidymass/metpath

Pathway analysis for metabolomics data

.RData (1)

.Rbuildignore

.gitignore

DESCRIPTION

LICENSE

LICENSE.md

NAMESPACE

NEWS

NEWS.md R/1_metpath_logo.R R/2_all_generics.R R/attach.R R/conflicts.R R/data.R R/dplyr-enrich_result.R R/dplyr-pathway_database.R R/enrich_hmdb.R R/enrich_kegg.R R/enrich_result_class.R R/filter_pathways.R R/global_variables.R R/graphics.R R/hmdb_database.R R/kegg_database.R R/pathway_database-class.R R/pathway_database-methods.R R/reactome_database.R R/utils.R R/zzz.R README.md

_pkgdown.yml

data/hmdb_compound_database.rda

data/hmdb_pathway.rda

data/kegg_compound_database.rda

data/kegg_hsa_pathway.rda

data/query_id_hmdb.rda

data/query_id_kegg.rda

docs/404.html

docs/LICENSE-text.html

docs/LICENSE.html

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docs/articles/contact_us.html

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docs/articles/contact_us_files/htmlwidgets-1.5.3/htmlwidgets.js

docs/articles/contact_us_files/htmlwidgets-1.5.4/htmlwidgets.js

docs/articles/contact_us_files/jquery-1.12.4/jquery.min.js

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docs/articles/contact_us_files/leaflet-1.3.1/leaflet.css

docs/articles/contact_us_files/leaflet-1.3.1/leaflet.js

docs/articles/contact_us_files/leaflet-binding-2.0.4.1/leaflet.js

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docs/articles/contact_us_files/leaflet-binding-2.1.1/leaflet.js

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docs/articles/contact_us_files/proj4-2.6.2/proj4.min.js

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docs/articles/contact_us_files/rstudio_leaflet-1.3.1/rstudio_leaflet.css

docs/articles/hmdb_pathway_enrichment.html

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docs/articles/hmdb_pathway_enrichment_files/header-attrs-2.9/header-attrs.js

docs/articles/index.html

docs/articles/install.html

docs/articles/kegg_pathway_enrichment.html

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docs/articles/kegg_pathway_enrichment_files/header-attrs-2.9/header-attrs.js

docs/articles/metpath.html

docs/articles/metpath_files/header-attrs-2.9/header-attrs.js

docs/articles/pathway_database.html

docs/articles/pathways_database.html

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docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

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docs/reference/enrich_bar_plot.html

docs/reference/enrich_hmdb.html

docs/reference/enrich_kegg.html

docs/reference/enrich_network.html

docs/reference/enrich_result-class.html

docs/reference/enrich_result_class-class.html

docs/reference/enrich_scatter_plot.html

docs/reference/extract-pathway_database.html

docs/reference/figures/logo.png

docs/reference/figures/metpath_logo.png

docs/reference/filter_pathway.html

docs/reference/get_hmdb_compound.html

docs/reference/get_hmdb_pathway.html

docs/reference/get_kegg_compound.html

docs/reference/get_kegg_pathway.html

docs/reference/get_pathway_class.html

docs/reference/hmdb_compound_database.html

docs/reference/hmdb_pathway.html

docs/reference/index.html

docs/reference/kegg_compound_database.html

docs/reference/kegg_hsa_pathway.html

docs/reference/metpath_conflicts.html

docs/reference/metpath_logo.html

docs/reference/metpath_packages.html

docs/reference/pathway_database-class.html

docs/reference/pathway_database_class-class.html

docs/reference/query_id_hmdb.html

docs/reference/query_id_kegg.html

docs/reference/reexports.html

docs/reference/set_label.html

docs/sitemap.xml

man/enrich_bar_plot.Rd man/enrich_hmdb.Rd man/enrich_kegg.Rd man/enrich_network.Rd man/enrich_result-class.Rd man/enrich_scatter_plot.Rd

man/figures/logo.png

man/figures/metpath_logo.png

man/filter_pathway.Rd man/get_hmdb_compound.Rd man/get_hmdb_pathway.Rd man/get_kegg_compound.Rd man/get_kegg_pathway.Rd man/get_pathway_class.Rd man/hmdb_compound_database.Rd man/hmdb_pathway.Rd man/kegg_compound_database.Rd man/kegg_hsa_pathway.Rd man/metpath_conflicts.Rd man/metpath_logo.Rd man/metpath_packages.Rd man/pathway_database-class.Rd man/query_id_hmdb.Rd man/query_id_kegg.Rd man/reexports.Rd man/set_label.Rd

metpath.Rproj

pkgdown/favicon/apple-touch-icon-120x120.png

pkgdown/favicon/apple-touch-icon-152x152.png

pkgdown/favicon/apple-touch-icon-180x180.png

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pkgdown/favicon/apple-touch-icon.png

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pkgdown/favicon/favicon.ico

tests/testthat.R tests/testthat/test-dplyr-filter.R vignettes/contact_us.Rmd vignettes/hmdb_pathway_enrichment.Rmd vignettes/install.Rmd vignettes/kegg_pathway_enrichment.Rmd vignettes/metpath.Rmd vignettes/pathway_database.Rmd

tidymass/metpath documentation built on July 21, 2023, 3:11 p.m.