Files in tkonopka/RGeneticThesaurus
Analysis of thesaurus-annotated genomic variants
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
R/RGTvcftools.R
README.md
inst/doc/RGeneticThesaurus-vignette.html
inst/doc/RGeneticThesaurus-vignette.md
inst/extdata/germline.vcf
inst/extdata/normal.bam
inst/extdata/normal.bam.bai
inst/extdata/normal.mmq1.vcf.gz
inst/extdata/normal.mmq16.vcf.gz
inst/extdata/somatic.vcf
inst/extdata/tumor.bam
inst/extdata/tumor.bam.bai
inst/extdata/tumor.mmq1.thesaurus.baf.tsv.gz
inst/extdata/tumor.mmq1.thesaurus.vcf.gz
inst/extdata/tumor.mmq1.thesaurus.vtf.gz
inst/extdata/tumor.mmq1.vcf.gz
inst/extdata/tumor.mmq16.thesaurus.baf.tsv.gz
inst/extdata/tumor.mmq16.thesaurus.vcf.gz
inst/extdata/tumor.mmq16.thesaurus.vtf.gz
inst/extdata/tumor.mmq16.vcf.gz
man/callBafChanges.Rd
man/callTrioDeNovo.Rd
man/compareVariants.Rd
man/isIndel.Rd
man/print.RGeneticThesaurusSet.Rd
man/readBafFromFile.Rd
man/readClustersFromFile.Rd
man/readLinksFromFile.Rd
man/readThesaurusSet.Rd
man/readVariantsFromFile.Rd
man/sortvcf.Rd
vignettes/RGeneticThesaurus-vignette.Rmd
vignettes/RGeneticThesaurus-vignette.Rmd~
