CytoscapeConnectionClass-class: Class "CytoscapeConnectionClass"

In tmuetze/Bioconductor_RCy3_the_new_RCytoscape: Display and manipulate graphs in Cytoscape >= 3.3.0

Description

A class providing access to operations of the Cytoscape application which are not specific to a particular window.

Slots

uri:

An attrData, the address of the Cytoscape server.

Methods

ping

version

getWindowcount

getWindowID

getWindowCount

getWindowList

destroyWindow

destroyAllWindows

getNodeShapes

getAttributeClassNames

getLineStyles

getArrowShapes

haveNodeAttribute

haveEdgeAttribute

copyNodeAttributesFromCyGraph

copyEdgeAttributesFromCyGraph

getGraphFromCyWindow

hidePanel

dockPanel

floatPanel

Author(s)

Tanja Muetze, Georgi Kolishovski, Paul Shannon

Examples

  ## Not run: 
  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())
  # create a CytoscapeConnectionClass object by calling the constructor
  cy <- CytoscapeConnection (host='localhost', port=1234)


## End(Not run)

tmuetze/Bioconductor_RCy3_the_new_RCytoscape documentation built on May 31, 2019, 4:39 p.m.