CytoscapeConnectionClass-class: Class "CytoscapeConnectionClass"

Description Slots Methods Author(s) Examples

Description

A class providing access to operations of the Cytoscape application which are not specific to a particular window.

Slots

uri:

An attrData, the address of the Cytoscape server.

Methods

ping
version
getWindowcount
getWindowID
getWindowCount
getWindowList
destroyWindow
destroyAllWindows
getNodeShapes
getAttributeClassNames
getLineStyles
getArrowShapes
haveNodeAttribute
haveEdgeAttribute
copyNodeAttributesFromCyGraph
copyEdgeAttributesFromCyGraph
getGraphFromCyWindow
hidePanel
dockPanel
floatPanel

Author(s)

Tanja Muetze, Georgi Kolishovski, Paul Shannon

Examples

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  ## Not run: 
  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())
  # create a CytoscapeConnectionClass object by calling the constructor
  cy <- CytoscapeConnection (host='localhost', port=1234)


## End(Not run)

tmuetze/Bioconductor_RCy3_the_new_RCytoscape documentation built on May 31, 2019, 4:39 p.m.