mincover: Compute minimum size of cover of overlapping intervals.

In tobyjohnson/gtx: Genetics ToolboX

Description

Compute minimum size of cover of overlapping intervals.

Usage

mincover(x.begin, x.end, trunc.begin = NULL, trunc.end = NULL)

Arguments

x.begin	a vector of interval begin positions.
x.end	a vector of interval end positions.
trunc.begin	truncaction value.
trunc.end	truncation value.

Details

Note all arguments are coerced to integers.

Value

An integer, the total size covered by the union of all intervals.

Author(s)

Toby Johnson [e-mail]

Examples

mincover(c(1, 5, 10, 11, 22), c(8, 17, 13, 19, 25))
## first to fourth intervals all overlap
## third interval 10:13 entirely inside second interval 5:17

tobyjohnson/gtx documentation built on Aug. 30, 2019, 8:07 p.m.