get_all_domains_oma: Create domain annotation dataframe from a raw OMA dataframe

Description Usage Arguments Value Author(s) See Also Examples

Description

Create domain annotation dataframe from a raw OMA dataframe

Usage

1
get_all_domains_oma(final_oma_df)

Arguments

final_oma_df

raw OMA data for a list of input IDs

Value

domain annotation in a dataframe to input into PhyloProfile, which contains seed ID, ortholog ID, ortholog length, annotated feature, start and end position of that feature.

Author(s)

Vinh Tran tran@bio.uni-frankfurt.de

See Also

get_data_for_one_oma

Examples

1
2
oma_data <- get_data_for_one_oma("HUMAN29397", "OG")
get_all_domains_oma(oma_data)

trvinh/test documentation built on May 9, 2019, 2:26 a.m.