rm_outliers: Remove outliers in peptide data

In tsoleary/proteomixr: Label-free quantitative proteomics & D3-Leu turnover

Description

Creates a new data frame with the outliers from original data frame removed. Outliers are defined as ratios

Usage

rm_outliers(dat, pro_df, ratio, mult = 2)

Arguments

dat	a data frame
pro_df	a data fram containing average ratio of each protein
ratio	a character string of the column name of the ratio used to find outliers
mult	multiplier of the sd used to determine the min and max allowable ratio for each peptide, defaults to 2

Examples

data_rm_out <- rm_outliers(df, pro_df, "ratio")

tsoleary/proteomixr documentation built on July 19, 2019, 8:37 a.m.