Description Usage Arguments Examples
Plots changing protein abundance over time for two different groups
1 2 | plot_pro(dat, g_title, FUN = geom_jitter, x_pos = 9, y1_pos = 0.83,
y2_pos = 0.3)
|
dat |
a data frame containing abundance and week columns |
g_title |
title of the plot |
FUN |
geom_jitter or geom_point |
x_pos, y1_pos, y2_pos |
x and y coordinates of the linear eqn and r-squared objects |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 | pros <- as.character(unique(df$Master.Protein.Accessions))
plot_list <- list()
for (pro in pros){
gene <- indiv_mpa_to_gene(pro, protein)
temp_df <- filter(df, Master.Protein.Accessions == pro)
g <- plot_pro(temp_df, g_title = gene)
plot_list[[pro]] <- g
}
pdf("all_plots.pdf", width = 10.75, height = 6)
for(pro in pros){
print(plot_list[[pro]])
}
|
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