square_x_df: Pooled standard deviation calculation intermediate
In tsoleary/proteomixr: Label-free quantitative proteomics & D3-Leu turnover
Description
Usage
Arguments
Examples
Description
Multiplies the square of the sd by the degrees of freedom. Used as an
intermediate as part of the calculation to get the pooled standard deviation
of a protein group. Returns a vector with the pooled sd calc intermediate
Usage
1
square_x_df(dat, sd, df)
Arguments
dat
a data frame with peptide level data as rows and samples in columns
sd
peptide level sd of a ratio or median abundance
df
degrees of freedom
Examples
1
df$sd_calc <- square_x_df(df,"group1_sd", "group1_df")
tsoleary/proteomixr documentation built on July 19, 2019, 8:37 a.m.
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Description Usage Arguments Examples
Description
Multiplies the square of the sd by the degrees of freedom. Used as an intermediate as part of the calculation to get the pooled standard deviation of a protein group. Returns a vector with the pooled sd calc intermediate
Usage
1 | square_x_df(dat, sd, df)
|
Arguments
dat |
a data frame with peptide level data as rows and samples in columns |
sd |
peptide level sd of a ratio or median abundance |
df |
degrees of freedom |
Examples
1 | df$sd_calc <- square_x_df(df,"group1_sd", "group1_df")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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