API for ttriche/chromophobe
Explore genomic state models, predictions, sample compositions & overlaps

Global functions
.Rle	Source code
.addLabels	Source code Source code
.aggMix	Source code
.aggPure	Source code
.coll	Source code
.collapseStates	Source code
.combStates	Source code
.combineStates	Source code
.decode	Source code
.encode	Source code
.fixAngles	Source code Source code
.getAngles	Source code Source code
.getDjHMM	Source code
.getHjust	Source code Source code
.getLabel	Source code Source code
.getPercent	Source code Source code
.getSimpleCols	Source code
.matchState	Source code
.recode	Source code
.toHex	Source code Source code
GenomicSegmentation	Man page Source code
GenomicSegmentationList	Man page Source code
addColors	Source code
addRoadmapColors	Man page Source code
aggregateStates	Man page Source code
asRaggedExperiment	Man page Source code
chromophobe	Man page
chromophobe-package	Man page
collapseAt	Man page Source code
colorHMM	Man page Source code
compressAndExportHMM	Man page Source code
donutPlot	Man page Source code
genomeFrac	Man page Source code
getConditions	Man page Source code
getStackedState	Man page Source code
getState	Man page Source code
getStates	Man page Source code
importAndSimplifyHMM	Man page Source code
makeAndExportDisjointHMM	Man page Source code
makeAndExportStackedHMM	Man page Source code
regionFrac	Man page Source code
simplify	Source code
simplifyHMM	Man page Source code
stackHMMs	Man page Source code
stackedPlot	Man page Source code

ttriche/chromophobe documentation built on Oct. 14, 2024, 11:59 a.m.

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