addRoadmapColors: convenience function to relabel states with standard colors
In ttriche/chromophobe: Explore genomic state models, predictions, sample compositions & overlaps
View source: R/addRoadmapColors.R
addRoadmapColors R Documentation
convenience function to relabel states with standard colors
Description
convenience function to relabel states with standard colors
Usage
addRoadmapColors(HMM, what = c("mnemonic", "state", "num"), cols = NULL)
Arguments
HMM
a GRanges with !is.null(mcols(HMM)$name)
what
is $name a "state", state"num", or "mnemonic"? ("mnemonic")
cols
which colors to use? (default is 18-state Roadmap colors)
Value
a GRanges with adjusted colors
ttriche/chromophobe documentation built on Oct. 14, 2024, 11:59 a.m.
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View source: R/addRoadmapColors.R
| addRoadmapColors | R Documentation |
convenience function to relabel states with standard colors
Description
convenience function to relabel states with standard colors
Usage
addRoadmapColors(HMM, what = c("mnemonic", "state", "num"), cols = NULL)
Arguments
HMM |
a GRanges with !is.null(mcols(HMM)$name) |
what |
is $name a "state", state"num", or "mnemonic"? ("mnemonic") |
cols |
which colors to use? (default is 18-state Roadmap colors) |
Value
a GRanges with adjusted colors
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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