colorHMM: add (new) colors to a ChromHMM track
In ttriche/chromophobe: Explore genomic state models, predictions, sample compositions & overlaps
colorHMM R Documentation
add (new) colors to a ChromHMM track
Description
add (new) colors to a ChromHMM track
Usage
colorHMM(HMM, cols = NULL, how = c("MNEMONIC", "STATE", "NUMBER"))
Arguments
HMM
a GRanges from an ChromHMM segmentation
cols
a data.frame of colors and associated states
how
how to match the HMM states to those in cols? ("MNEMONIC")
Value
same HMM but with better colors
ttriche/chromophobe documentation built on Oct. 14, 2024, 11:59 a.m.
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| colorHMM | R Documentation |
add (new) colors to a ChromHMM track
Description
add (new) colors to a ChromHMM track
Usage
colorHMM(HMM, cols = NULL, how = c("MNEMONIC", "STATE", "NUMBER"))
Arguments
HMM |
a GRanges from an ChromHMM segmentation |
cols |
a data.frame of colors and associated states |
how |
how to match the HMM states to those in cols? ("MNEMONIC") |
Value
same HMM but with better colors
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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