donutPlot: simple function for a donut plot of state width/count...

In ttriche/chromophobe: Explore genomic state models, predictions, sample compositions & overlaps

simple function for a donut plot of state width/count fractions

Description

by default, use genomeFrac to determine how much of each state is represented

Usage

donutPlot(
  gs,
  text = NULL,
  colorScheme = NULL,
  ...,
  fracSize = 5,
  legend = FALSE
)

Arguments

gs	a GenomicSegmentation or similar, or a data.frame
text	text to put in the middle of the donut (NULL)
colorScheme	named vector of colors (default is simplified REMC)
...	additional arguments to pass to genomeFrac
fracSize	how big the text should be (5x typical label)
legend	legend? (FALSE; no legend)

Value

a plot

ttriche/chromophobe documentation built on Oct. 14, 2024, 11:59 a.m.