getBinarySubTree: Get the left or right subtree of a given hierarchical...

In uc-bd2k/gimmR: This package was built to cluster gene expression data using the Gaussian Infinite Mixture Model.

Description

Reads a hierarchical clustering and returns the left or right child of the root node.

Usage

getBinarySubTree(tree, right = FALSE)

Arguments

tree	An hclust object
right	If TRUE, return the right subtree, i.e. the right child of the root node.

Value

The subtree as an hclust object.

Author(s)

Johannes Freudenberg, Xiangdong Liu, Mario Medvedovic

See Also

hclust

Examples

hc <- hclust(dist(matrix(1:20,5)))
hc$labels <- 1:5
plot(hc)
hc.sub <- getBinarySubTree(hc, TRUE)
plot(hc.sub)

uc-bd2k/gimmR documentation built on May 3, 2019, 2:15 p.m.