tableToInp: Function to convert Gene data table object to Inp format.

In uc-bd2k/gimmR: This package was built to cluster gene expression data using the Gaussian Infinite Mixture Model.

Description

This function is used to produce the .Inp file from the Gene Data table object. The executable "gimm" uses this ".inp" file to get the informations regarding the Genes.

Usage

tableToInp(geneDataTable, fileName, M)

Arguments

geneDataTable	Using this parameter, the Data table object can be passed to this function. If this object is absent, an error is thrown.
fileName	This parameter is used to provide the file name of the .inp file which will be created from the table object provided to this function.
M	Dimensionality of the expression vectors to be clustered. I.e. the number of microarray.

Value

This functions returns the same table object which is passed to this function.

Note

Email Address : [e-mail]

Author(s)

Vinayak Kumar, Mario Medvedovic

See Also

processPostHocParas, runGimmNPosthoc, processGimmParas

uc-bd2k/gimmR documentation built on May 3, 2019, 2:15 p.m.