Files in umerijaz/microbiomeSeq
Microbial community analysis in an environmental context.
.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/.DS_Store
R/.Rapp.history
R/KDA.R
R/alpha_div.R
R/co_occurence_network.R
R/co_occurence_stats.R
R/construct_network.R
R/differential_abundance.R
R/env_taxa_correlation.R
R/fso_dependancies.R
R/generateFSO.R
R/kruskal_abundance.R
R/microbiomeSeq_helper_fxns.R
R/module_roles.R
R/module_taxa_cor.R
R/normalisation_fxns.R
R/normalise_data.R
R/ordination.R
R/perform_anova.R
R/plot.ordination.R
R/plot_anova_diversity.R
R/plot_anova_env.R
R/plot_cca.R
R/plot_signif.R
R/plot_taxa.R
R/randomforest_res.R
R/taxa_level.R
README.md
data/pitlatrine.rda
disclaimer.png
man/KDA.Rd
man/alpha_div.Rd
man/co_occurence_network.Rd
man/differential_abundance.Rd
man/generateFSO.Rd
man/kruskal_abundance.Rd
man/module.roles.Rd
man/module_env_correlation.Rd
man/normalise_data.Rd
man/ordination.Rd
man/perform_anova.Rd
man/plot.ordination.Rd
man/plot_anova_diversity.Rd
man/plot_anova_env.Rd
man/plot_cca.Rd
man/plot_signif.Rd
man/plot_taxa.Rd
man/randomforest_res.Rd
man/taxa.env.correlation.Rd
man/taxa_level.Rd
microbiomeSeq.Rproj
vignettes/microbiomeSeq_Tutorial.pdf
vignettes/microbiomeSeq_Tutorial.pdf.asis
