Description Usage Arguments Value Author(s) References Examples
This function normalises taxa abundance
1 | normalise_data(physeq, norm.method, ...)
|
physeq |
(Required). A |
method |
(Required). A |
Returns a phyloseq object whose abundance data is normalised.
Alfred Ssekagiri assekagiri@gmail.com, Umer Zeeshan Ijaz Umer.Ijaz@glasgow.ac.uk
http://userweb.eng.gla.ac.uk/umer.ijaz/, Umer Ijaz, 2015
1 2 3 4 5 | data(pitlatrine)
physeq<-data(pitlatrine)
physeq <- normalise_data(physeq,method = "randomsubsample")
physeq <- normalise_data(physeq,method = "edgeRnorm")
physeq <- normalise_data(physeq,method = "proportion")
|
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