RealDataSimulation: Generate real data for analysis

Description Usage Arguments

View source: R/SimulationDataGeneration.R

Description

Generate real data for analysis

Usage

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RealDataSimulation(simul.data, dataset, samples.per.cond, fpc = FALSE,
  dataset.parameters)

Arguments

simul.data

Characters indicating which dataset will be used for simulation data generation "KIRC" for KIRC dataset. "Bottomly" for Bottomly dataset. "SEQC" for SEQC ERCC Spike-In dataset.

dataset

Characters specifying the file name of simulation dataset.

samples.per.cond

An integer indicating number of samples for each condition (e.g. 3).

fpc

A logical indicating whether simulation data is made from single sample condition(e.g. normal) to calculate False positive counts. Default is FALSE.

dataset.parameters

A list containing estimated mean and dispersion parameters and filtered count from original count dataset.


unistbig/compareDEtools documentation built on May 1, 2020, 9:41 p.m.