import.Macs2Peaks: Import the MACS2 peak file
In uzh/ezRun: An R meta-package for the analysis of Next Generation Sequencing Data
import.Macs2Peaks R Documentation
Import the MACS2 peak file
Description
Read the MACS2 peak file into a GRanges.
Usage
import.Macs2Peaks(con)
Arguments
con
character(1): the filepath of MACS2 peak file.
Value
A GRanges object with extra columns.
Author(s)
Ge Tan
References
https://github.com/taoliu/MACS
Examples
## Not run:
bedFn <- "/srv/gstore/projects/p2578/MACS2_21885_2018-01-29--13-11-27/C8301US_peaks.bed"
bedGR <- import.Macs2Peaks(bedFn)
## End(Not run)
uzh/ezRun documentation built on April 24, 2024, 4:01 p.m.
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| import.Macs2Peaks | R Documentation |
Import the MACS2 peak file
Description
Read the MACS2 peak file into a GRanges.
Usage
import.Macs2Peaks(con)
Arguments
con |
|
Value
A GRanges object with extra columns.
Author(s)
Ge Tan
References
https://github.com/taoliu/MACS
Examples
## Not run:
bedFn <- "/srv/gstore/projects/p2578/MACS2_21885_2018-01-29--13-11-27/C8301US_peaks.bed"
bedGR <- import.Macs2Peaks(bedFn)
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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