parseEnrichrLibNames: Retrieve Enrichr library names

In uzh/ezRun: An R meta-package for the analysis of Next Generation Sequencing Data

Retrieve Enrichr library names

Description

Retrieves Enrichr library names from the specified HTML file and saves it to the internal package file (extdata/enrichr_libnames.txt). Ideally, this method would fetch the data from http://amp.pharm.mssm.edu/Enrichr/#stats. However, the page uses an Ajax query to populate the table, so it is empty when you access it with libcurl. Note: this does not modify the file in your source directory but the file in your installed package

Usage

parseEnrichrLibNames(file)

Arguments

file	location of the HTML file saved from http://amp.pharm.mssm.edu/Enrichr/#stats

Value

(invisibly) a vector containing library names

Author(s)

Rehrauer, Hubert

Schmid, Peter

Roman Briskine

See Also

runEnrichr

uzh/ezRun documentation built on Dec. 26, 2024, 9:53 a.m.