phyloSeqToDeseq2_tableAndPlots: Differential abundance analysis between groups
In uzh/ezRun: An R meta-package for the analysis of Next Generation Sequencing Data
View source: R/mothurPhyloseqAssociatedFunctions.R
phyloSeqToDeseq2_tableAndPlots R Documentation
Differential abundance analysis between groups
Description
Comaprison of metagenomics communities from files stored as a phyloseq object.
Usage
phyloSeqToDeseq2_tableAndPlots(phyloseqObj, rank, group, sampleGroup, refGroup)
Arguments
phyloseqObj
a phyloseq object.
Value
Returns a list of tables and plots.
uzh/ezRun documentation built on Dec. 26, 2024, 9:53 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/mothurPhyloseqAssociatedFunctions.R
| phyloSeqToDeseq2_tableAndPlots | R Documentation |
Differential abundance analysis between groups
Description
Comaprison of metagenomics communities from files stored as a phyloseq object.
Usage
phyloSeqToDeseq2_tableAndPlots(phyloseqObj, rank, group, sampleGroup, refGroup)
Arguments
phyloseqObj |
a phyloseq object. |
Value
Returns a list of tables and plots.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.