plotLocusCoverageProfile: Title
In uzh/ezRun: An R meta-package for the analysis of Next Generation Sequencing Data

plotLocusCoverageProfile

R Documentation

Title

Description

Title

Usage

plotLocusCoverageProfile(
  gRanges,
  bamFiles,
  gtfFile = NULL,
  height = 10,
  width = 20
)

Arguments

`gRanges`
`bamFiles`
`gtfFile`
`height`
`width`

Examples

## Not run: 
require(GenomicRanges)
require(ezRun)
gtfFile = "/srv/GT/reference/Homo_sapiens/Ensembl/GRCh38.p10/Annotation/Release_89-2017-05-31/Genes/genes.gtf"
myGeneRange = GRanges(seqnames="2", ranges=IRanges(start=1, end=1000, name="foo"))
plotLocusCoverageProfile(myGeneRange, bamFiles, gtfFile=gtfFile,
                         height=20, width=20)

## End(Not run)

uzh/ezRun documentation built on Dec. 26, 2024, 9:53 a.m.