processSamples: generate smallRNA counts and QC.

In uzh/ezRun: An R meta-package for the analysis of Next Generation Sequencing Data

generate smallRNA counts and QC.

Description

Obtain counts and QC plots across all samples.

Usage

processSamples(samplePaths, outputDir)

Arguments

samplePaths	<string> vector of all the files that need to be processed together.
outputDir	<string> directory name where to output generated objects and report after processing.
getPlotsObjects	<bool> TRUE to output plots as an object.

Author(s)

(Rob Kitchen) Miquel Anglada Girotto

uzh/ezRun documentation built on March 5, 2025, 3:41 p.m.