scExp: A SingleCellExperiment object containing the scH3K27ac part...
In vallotlab/IDclust: Iterative Differential Clustering for single-cell
scExp R Documentation
A SingleCellExperiment object containing the scH3K27ac part of Paired-Tag
dataset. (Paired-Tag - H3K27ac)
Description
A SingleCellExperiment object of a subset of 2000 x 5000 cells
by features of the
Paired-Tag multiomic
paper. The metadata contains annotation from the author as well as
iterative differential clusters run on the subset of cells and features The
counts were analyzed with ChromSCape package.
Usage
data("scExp")
Format
scExp - A SingleCellExperiment object. See
SingleCellExperiment::SingleCellExperiment.
References
Joint profiling of histone modifications and transcriptome in single cells
from mouse brain, Chenxu Zhu, Yanxiao Zhang, Yang Eric Li, Jacinta Lucero,
. Margarita Behrens, Bing Ren, Nature Methods, 2021
Paired-Tag
vallotlab/IDclust documentation built on Feb. 16, 2023, 8:58 a.m.
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| scExp | R Documentation |
A SingleCellExperiment object containing the scH3K27ac part of Paired-Tag dataset. (Paired-Tag - H3K27ac)
Description
A SingleCellExperiment object of a subset of 2000 x 5000 cells by features of the Paired-Tag multiomic paper. The metadata contains annotation from the author as well as iterative differential clusters run on the subset of cells and features The counts were analyzed with ChromSCape package.
Usage
data("scExp")
Format
scExp - A SingleCellExperiment object. See SingleCellExperiment::SingleCellExperiment.
References
Joint profiling of histone modifications and transcriptome in single cells from mouse brain, Chenxu Zhu, Yanxiao Zhang, Yang Eric Li, Jacinta Lucero, . Margarita Behrens, Bing Ren, Nature Methods, 2021 Paired-Tag
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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