dada2_export: Export a data frame to dada2 AssignTaxonomy compatible format
In vaulot/dvutils: A set of utilities
Description
Usage
Arguments
Value
Examples
Description
This will save data frame to dada2 AssignTaxonomy compatible format
Usage
1
dada2_export(df, file_name, taxo_levels_number = 9)
Arguments
df
data frame - should contain 8 or 9 columns with taxo levels and 1 column with sequences
file_name
character - full path of file where to save
Value
Write the file in compressed format (.gz)
Examples
1
pr2_export_dada2(my_sequences, "C:/Daniel/myfile.fas.gz", 8)
vaulot/dvutils documentation built on Nov. 20, 2021, 11:01 a.m.
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Description Usage Arguments Value Examples
Description
This will save data frame to dada2 AssignTaxonomy compatible format
Usage
1 | dada2_export(df, file_name, taxo_levels_number = 9)
|
Arguments
df |
data frame - should contain 8 or 9 columns with taxo levels and 1 column with sequences |
file_name |
character - full path of file where to save |
Value
Write the file in compressed format (.gz)
Examples
1 | pr2_export_dada2(my_sequences, "C:/Daniel/myfile.fas.gz", 8)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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