kmer: Get all kmers in a sequence
In vaulot/dvutils: A set of utilities
Description
Usage
Arguments
Value
Examples
Description
Helper function. The input is a set of sequences in a df and it returne a data frame with all kmer in column "sequence".
Note: Remove duplicates.
Usage
1
Arguments
seq
Character, the sequence to aanalyze
kmer_width
kmer size
Value
A data frame
Examples
1
kmer("CATATGCTTGTCTCAAAGTTAAGCCA", kmer_width = 8)
vaulot/dvutils documentation built on Nov. 20, 2021, 11:01 a.m.
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Description Usage Arguments Value Examples
Description
Helper function. The input is a set of sequences in a df and it returne a data frame with all kmer in column "sequence".
Note: Remove duplicates.
Usage
1 |
Arguments
seq |
Character, the sequence to aanalyze |
kmer_width |
kmer size |
Value
A data frame
Examples
1 | kmer("CATATGCTTGTCTCAAAGTTAAGCCA", kmer_width = 8)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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