Description Usage Arguments Value Examples
Does not write the GenBank file. Notes:
Use only sequence_keep = TRUE for simple gene sequences, else it may crash
Use acc_step = 1 if several accession numbers point to the same accession number (case of metagenomes). In this case the queries are sent one by one and the old accession number is kept.
1 | genbank_download_parse_rentrez(accession, sequence_keep = TRUE, acc_step = 50)
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accession |
Character vector of accession numbers |
sequence_keep |
Logical, if FALSE the sequence is not returned in the file data frame |
acc_step |
Integer, number of accession numbers for each query. |
Data frame with the metadata information.
1 | gb_metadata <- genbank_download_parse(accession = c("JX015376", "JQ768406", "LT621940"), sequence_keep=TRUE)
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