genbank_taxonomy: Read NCBI taxo
In vaulot/dvutils: A set of utilities
Description
Usage
Arguments
Value
Examples
Description
Reads directly from NCBI information taxo_lineage from set of taxo_id.
Note : the full NCBI taxonomy has been uploaded in the PR2 database, so this function is not really necessary.
Usage
1
genbank_taxonomy(taxo_id)
Arguments
taxo_id
A vector of genbank taxonomy ids
Value
A data frame with 2 columns.
Examples
1
gb_tax <- genbank_taxonomy(c("1230134", "1230316", "1905175"))
vaulot/dvutils documentation built on Nov. 20, 2021, 11:01 a.m.
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Description Usage Arguments Value Examples
Description
Reads directly from NCBI information taxo_lineage from set of taxo_id.
Note : the full NCBI taxonomy has been uploaded in the PR2 database, so this function is not really necessary.
Usage
1 | genbank_taxonomy(taxo_id)
|
Arguments
taxo_id |
A vector of genbank taxonomy ids |
Value
A data frame with 2 columns.
Examples
1 | gb_tax <- genbank_taxonomy(c("1230134", "1230316", "1905175"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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