pruneTree: Extract information for fast likelihood calculation using the...
In venelin/POUMM: The Phylogenetic Ornstein-Uhlenbeck Mixed Model
pruneTree R Documentation
Extract information for fast likelihood calculation using the
breadth-first pruning algorithm.
Description
Extract information for fast likelihood calculation using the
breadth-first pruning algorithm.
Usage
pruneTree(tree, z, se = 0)
Arguments
tree
a phylo object
z
Numeric vector with length(tree$tip.label) values
corresponding to tree$tip.label.
se
Non-negative numerical or N-vector indicating known
standard measurement error.
Value
a list of objects used for likelihood evaluation
venelin/POUMM documentation built on June 13, 2025, 10:15 p.m.
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| pruneTree | R Documentation |
Extract information for fast likelihood calculation using the breadth-first pruning algorithm.
Description
Extract information for fast likelihood calculation using the breadth-first pruning algorithm.
Usage
pruneTree(tree, z, se = 0)
Arguments
tree |
a phylo object |
z |
Numeric vector with length(tree$tip.label) values corresponding to tree$tip.label. |
se |
Non-negative numerical or N-vector indicating known standard measurement error. |
Value
a list of objects used for likelihood evaluation
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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