Description Usage Arguments Examples
View source: R/MarkdownReportsDev.R
Create and save violin plots as .pdf, in "OutDir". It requires (and calls) "vioplot" package. If mdlink = TRUE, it inserts a .pdf and a .png link in the markdown report, set by "path_of_report". The .png version is not created, only the link is put in place, not to overwrite previous versions.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 | wvioplot_list(
yourlist,
...,
main = as.character(substitute(yourlist)),
sub = NULL,
xlab = names(yourlist),
ylab = "",
ylim = FALSE,
col = c(2:(length(yourlist) + 1)),
incrBottMarginBy = 0,
tilted_text = FALSE,
yoffset = 0,
savefile = unless.specified("b.save.wplots"),
w = unless.specified("b.defSize", 7),
h = w,
mdlink = ww.set.mdlink(),
PNG = unless.specified("b.usepng", F)
)
|
yourlist |
Input list to be plotted. |
... |
Pass any other parameter of the corresponding plotting function(most of them should work). |
main |
Title of the plot (main parameter) and also the name of the file. |
sub |
Subtitle below the plot. |
xlab |
X-axis label. |
ylab |
Y-axis label. |
ylim |
Manual y axis limits |
col |
Color of the plot. |
incrBottMarginBy |
Increase the blank space at the bottom of the plot. Use if labels do not fit on the plot. |
tilted_text |
Use 45 degree x-labels if TRUE. Useful for long, but not too many labels. |
yoffset |
Offset for X axis labels (in vertical / Y dimension). |
savefile |
Save plot as pdf in OutDir, TRUE by default. |
w |
Width of the saved pdf image, in inches. |
h |
Height of the saved pdf image, in inches. |
mdlink |
Insert a .pdf and a .png image link in the markdown report, set by "path_of_report". |
PNG |
Set to true if you want to save the plot as PNG instead of the default PDF. |
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