add_qual_from_vcf: Add QUAL from a VCF into a master table

In vladimirsouza/lrRNAseqBenchmark: Figure out how to call varaints from Iso-Seq data

Add QUAL from a VCF into a master table

Description

Add QUAL to master table.

Usage

add_qual_from_vcf(input_table, method_name, vcf_file)

Arguments

input_table	A data.frame. The master table to add the new column.
method_name	A 1-lenght string. The name of the method from which is desirable to get the QUAL values. The new column is named as "qual_<method_name>".
vcf_file	A 1-lenght string. The path of the VCF file from which the the QUAL values are extracted.

Value

A data.frame

vladimirsouza/lrRNAseqBenchmark documentation built on March 23, 2023, 7:32 a.m.