phyloseq_otu_appearance: Determine which OTUs appeared or disappeared in comparison...

View source: R/phyloseq_extract_otus.R

phyloseq_otu_appearanceR Documentation

Determine which OTUs appeared or disappeared in comparison with reference sample group.

Description

Determine which OTUs appeared or disappeared in comparison with reference sample group.

Usage

phyloseq_otu_appearance(phys, ref_level)

Arguments

phys

A phyloseq-class object

ref_level

Sample name(s) relative to which appearance or disappearance of OTU will be measured

Value

List with OTU names that appeared, disappeared or remained.


vmikk/metagMisc documentation built on June 20, 2024, 7:20 a.m.