phyloseq_replace_zero: Replace zeros in OTU abundance

View source: R/phyloseq_transform.R

phyloseq_replace_zeroR Documentation

Replace zeros in OTU abundance

Description

Replace zeros in OTU abundance

Usage

phyloseq_replace_zero(physeq, method = "pseudocount", pseudocount = 0.65)

Arguments

physeq

A phyloseq-class object

method

Which method to apply for zero replacement ("pseudocount")

pseudocount

Constant value

Value

Phyloseq object with transformed counts in OTU table.


vmikk/metagMisc documentation built on June 20, 2024, 7:20 a.m.