phyloseq_sep_samp: Separate phyloseq-class object by sample.

In vmikk/metagMisc: Miscellaneous functions for metagenomic analysis

Separate phyloseq-class object by sample.

Description

This function splits a phyloseq object by sample, returning a list of objects whose components each correspond to a separate sample.

Usage

phyloseq_sep_samp(physeq, drop_zeroes = T)

Arguments

physeq	A phyloseq-class object
drop_zeroes	Logical, indicating weather OTUs with zero abundance or samples with zero total abundance should be removed

Value

List with phyloseq objects.

Examples

data("esophagus")
phyloseq_sep_samp(esophagus)

vmikk/metagMisc documentation built on June 20, 2024, 7:20 a.m.