phaseSibFamily: Phase Sibling Family by Haplotype Imputation
In vsbuffalo/ProgenyArray: Some statistical genetics for progeny array experiments
Description
Phase Sibling Family by Haplotype Imputation
Usage
1
2
phaseSibFamily(x, sibfam, chrom, tiles, ehet = 0.8, ehom = 0.1,
na_thresh = 0.8)
Arguments
x
a ProgenyArray object
sibfam
a dataframe from sibFamily()
chrom
which chromosome to use
tiles
a PhasingTiles object
ehet
heterozygous error rate
ehom
homozygous error rate
na_thresh
missingness threshold to remove individual from clustering
vsbuffalo/ProgenyArray documentation built on May 3, 2019, 6:41 p.m.
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Description
Phase Sibling Family by Haplotype Imputation
Usage
1 2 | phaseSibFamily(x, sibfam, chrom, tiles, ehet = 0.8, ehom = 0.1,
na_thresh = 0.8)
|
Arguments
x |
a ProgenyArray object |
sibfam |
a dataframe from |
chrom |
which chromosome to use |
tiles |
a PhasingTiles object |
ehet |
heterozygous error rate |
ehom |
homozygous error rate |
na_thresh |
missingness threshold to remove individual from clustering |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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