plotCM.dataframe: Plot a connectivity matrix from a dataframe

In wStockhausen/wtsDisMELSConn: Functions for dealing with DisMELS IBM model output, including calculating and analyzing connectivity matrices

Description

Plot a connectivity matrix from a dataframe.

Usage

plotCM.dataframe(tbl, zmax = NULL, zmin = 0, title = NULL, xlab = xlab,
  ylab = ylab, devtype = "win", cex = 1 * (devtype == "win") + 1.5 *
  (devtype != "win"), colorscale = c("hot", "cold", "coldhot"),
  plotfile = "CM.png", plotsize = c(970, 780))

Arguments

tbl	- dataframe or matrix representation of a connectivity matrix (can be NULL)
zmax	- max value for color scale
zmin	- min value for color scale
title	- title for plot
xlab	- label for x axis
ylab	- label for y axis
devtype	- device type ('win' or 'png')
cex	- character expansion factor for plot
colorscale	- color scale to use for plot ('hot', 'cold' or 'coldhot')
plotfile	- file to save plot to (if devtype != 'win')
plotsize	- 2 element vector giving plot size in pixels (c(W,H))

Details

deprecated in favor of plotCM.GG.

wStockhausen/wtsDisMELSConn documentation built on May 3, 2019, 7:36 p.m.