table.cut: Cut the confusion table at threshods

In wyguo/RLowPC: Inference of co-expression gene network using relevance low order partial correlation from large scale expression data

Description

The confusion table output from table.evaluate is cut at a threshold of top weighted edges, FPR or TPR. The cutoff in the function must match to the cutat metrices.

Usage

table.cut(input.table, cutoff = 1000, cutat = "top")

Arguments

input.table	the confusion table output from table.evalution.
cutoff	a numeric value of threshold for "top", "fpr" or "tpr".
cutat	the options are "top", "fpr" and "tpr", which indicate to cut the confusion table at top weighted edges, FPR or TPR.

Value

table.cut returns a list of results cantains the table after applying cutoff, the pAUROC value, pAUPR value, precesion for the remained edges, the corresponding top, fpr, tpr cutoffs and the statistical measures after applying function confusion.

wyguo/RLowPC documentation built on May 4, 2019, 12:04 p.m.