zeroPC: Zero order partial correlation

Description Usage Arguments Value Examples

View source: R/zeroPC.R

Description

The correlation and p-value of correlation.

Usage

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zeroPC(data.exp, method = "pearson")

Arguments

data.exp

gene expression data.

method

"pearson", "spearman" or "kendall" method is used to calcuate the correlation values.

Value

zeroPC returns a data frame with columns of regulators, target genes, edge correlation weigthes, p-values, FRD and connection probability.

Examples

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##load data
data(gnwdata)
##ts expression
data.exp<-gnwdata$size100$ts1[,-c(1:3)]
inf.zeroPC<-zeroPC(data.exp)
head(inf.zeroPC)
##refernece network

wyguo/RLowPC documentation built on May 28, 2017, 7:34 a.m.