Venn_plot: Venn plot for the common CpG island and CpG island shore.

In xiaowangCN/GeneDMRs: GeneDMRs: an R package for Gene-based differentially methylated regions analysis

Venn plot for the common CpG island and CpG island shore.

Description

This function outputs the venn plot for the common CpG island and CpG island shore regions that are covered by methylated cytosine sites based on R package VennDiagram.

Usage

Venn_plot(
  genefeatureall_cpgfeature_Qvalue,
  title = "Venn plot",
  fillcolor = c("cornflowerblue", "green")
)

Arguments

title	refers to the figure title, with default "Venn plot".
fillcolor	refers to the filled color, with default "cornflowerblue"and "green".
genefeatureall_cpgfeature	refers to the input file with Q values of two features.

Value

Outputs a venn figure in two features.

Examples

Venn_plot(genefeatureall_cpgfeature)
Venn_plot(genefeatureall_cpgfeature_Qvalue)
Venn_plot(genefeatureall_cpgfeature_Qvalue, fillcolor = c("red","blue"))

xiaowangCN/GeneDMRs documentation built on Nov. 22, 2023, 11:19 p.m.