print: out.R is used to print/plot data object in Rcppsva to...

In xinchoubiology/Rcppsva: Rcpp Integration Surrogate Variable Analysis

Description

out.R is used to print/plot data object in Rcppsva to validation output 450k microarray data frame with ordered positions to BED file

Usage

## S3 method for class 'module'
print(x, ...)

## S3 method for class 'BED'
print(x, bed = NULL,
  db = IlluminaHumanMethylation450kanno.ilmn12.hg19, ...)

Arguments

x	module object
...	other arguments
x	m x n matrix. Statitical test p-value and each row's name is its probes name
...	bed BED file name db Database of probes

Value

BED data.frame

Examples

require(IlluminaHumanMethylation450kanno.ilmn12.hg19)
data(IlluminaHumanMethylation450kanno.ilmn12.hg19)

xinchoubiology/Rcppsva documentation built on May 4, 2019, 1:06 p.m.